Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_03175Fatty acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
BF93_03180
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
BF93_06070
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.956
BF93_05815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.895
BF93_07360
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.893
BF93_11160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.865
BF93_16395
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.865
BF93_04765
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.864
BF93_12090
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.862
BF93_14150
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
BF93_16995
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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