Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family. (397 aa)    
Predicted Functional Partners:
BF93_11430
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.932
BF93_05175
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.887
BF93_03560
Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.885
BF93_04110
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.876
BF93_10840
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.843
BF93_06895
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.841
BF93_04160
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.811
BF93_03950
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.773
BF93_07715
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.769
BF93_10440
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.769
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.