Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_059503,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
BF93_15670
Enolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.842
BF93_09755
Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.769
BF93_04555
Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.600
BF93_01040
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.580
nnrD
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
       0.536
BF93_18490
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.535
BF93_01950
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.471
BF93_08350
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.471
BF93_09035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.471
BF93_18005
Phosphoribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.448
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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