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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_07645DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa)    
Predicted Functional Partners:
BF93_04960
DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
BF93_07625
DNA topoisomerase IV subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
BF93_02190
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.860
BF93_07650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.666
BF93_07830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.666
truB
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.648
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 
 0.626
BF93_07360
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.579
hisF
Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
    0.564
BF93_07635
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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