STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_08015Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
BF93_08020
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.929
BF93_07600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
BF93_08580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
BF93_07045
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.717
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
  
     0.713
BF93_06350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
BF93_18695
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
BF93_07605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
rbpA
Electron transporter; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.651
BF93_01550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.