STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_09005Enterochelin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
BF93_05385
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.615
BF93_16395
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.541
BF93_09000
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
BF93_09010
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
BF93_03275
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.494
BF93_16970
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
BF93_04665
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.438
BF93_05245
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
     
 0.429
BF93_16845
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.427
BF93_02660
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.425
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.