STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_11615Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
BF93_11610
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.958
BF93_14785
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.888
BF93_11605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.773
BF93_13460
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.724
BF93_05570
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.716
BF93_11800
Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.704
BF93_12395
Aldehyde dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.678
BF93_04550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.667
BF93_01150
Primary-amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.660
BF93_03195
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.647
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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