Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_12780ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
BF93_12785
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.956
BF93_12790
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.898
BF93_12795
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.852
BF93_03665
Glycine/betaine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.754
BF93_02855
Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.712
BF93_15855
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
BF93_09575
Anibiotic ABC transporter efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.606
BF93_12765
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
BF93_12770
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
BF93_12775
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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