STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAmethionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (236 aa)    
Predicted Functional Partners:
BF93_13230
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.808
BF93_15340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.808
BF93_02580
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.705
BF93_17880
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
BF93_05805
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.613
BF93_13655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.580
BF93_13660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BF93_13665
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BF93_13670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BF93_13675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.580
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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