Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_14070Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
BF93_14065
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.947
BF93_16590
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.898
BF93_16005
Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.678
BF93_14075
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.644
BF93_07570
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.575
BF93_07565
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.552
BF93_14080
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
BF93_14085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
BF93_06655
tRNA/rRNA cytosine-C5-methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
     
 0.446
BF93_17715
Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.418
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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