Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_14240Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GHMP kinase family. GalK subfamily. (419 aa)    
Predicted Functional Partners:
BF93_03005
Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.973
BF93_18155
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
BF93_08655
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
BF93_14235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
atpD
ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.650
BF93_16845
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.593
BF93_01790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.578
BF93_06275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.578
BF93_08080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.578
BF93_11920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.578
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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