STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_15185Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)    
Predicted Functional Partners:
BF93_15180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.889
BF93_15175
RNA polymerase sigma factor SigK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.842
BF93_07745
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.836
BF93_15170
Fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.759
BF93_03480
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.746
BF93_13430
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.701
BF93_00415
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.682
BF93_00405
Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.679
BF93_00410
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.640
BF93_15190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.520
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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