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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_15255Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)    
Predicted Functional Partners:
BF93_15240
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.973
BF93_15250
Cell wall biogenesis glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.960
BF93_15200
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.838
BF93_15205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.838
BF93_15220
Acetylneuraminic acid synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.792
BF93_15235
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
BF93_15260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.779
BF93_15245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
BF93_15195
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.758
BF93_15225
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.705
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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