Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
BF93_15665Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
BF93_15670
Enolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.835
BF93_15675
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
BF93_01775
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.614
BF93_08050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.606
BF93_15680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.557
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.490
BF93_01060
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.401
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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