STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_16585ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
BF93_16590
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
BF93_14065
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.939
BF93_16005
Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.770
BF93_07570
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
BF93_07565
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.699
BF93_16580
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
BF93_16575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
BF93_17715
Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.443
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.