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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_17130Exonuclease V subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (1147 aa)    
Predicted Functional Partners:
BF93_17125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
BF93_17235
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.912
BF93_17135
Pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
BF93_02190
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.740
BF93_02210
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.736
BF93_17110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.623
recA
Hypothetical protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.594
BF93_07900
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.512
BF93_17120
Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.484
BF93_17875
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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