STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_17580Small multidrug efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
BF93_08335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.701
BF93_17575
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
BF93_12215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
BF93_11870
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
BF93_17585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.543
BF93_05890
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
BF93_17570
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
BF93_11360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
BF93_12450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
BF93_15090
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.