STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_18795Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
BF93_16115
PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.917
mtlD
Mannitol-1-phosphate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.912
BF93_17660
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.863
BF93_00045
Trehalose phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.775
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.775
BF93_18785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
BF93_18790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
 
  0.695
BF93_04985
Hypothetical protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.640
BF93_08295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.617
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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