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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58671.1Competence protein. (337 aa)    
Predicted Functional Partners:
KRN58670.1
Competence negative regulator; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
 
     0.732
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
      
 0.732
KRN59373.1
Adenine-specific methyltransferase.
  
     0.714
KRN58723.1
Competence protein.
  
  
 0.685
KRN58669.1
Hypothetical protein; Belongs to the ArsC family.
 
     0.635
KRN58157.1
Ribonuclease BN; Belongs to the UPF0761 family.
  
     0.635
KRN59165.1
Replication initiation and membrane attachment protein DnaB.
  
     0.566
KRN58747.1
Hypothetical protein.
  
     0.548
KRN58856.1
Hypothetical protein.
  
     0.547
KRN58218.1
CamS sex pheromone cAM373 family protein.
  
     0.522
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.