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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58802.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
KRN58647.1
Branched-chain amino acid transport.
  
     0.771
KRN58435.1
Transcriptional regulator.
  
     0.761
KRN58646.1
Azaleucine resistance protein AzlC.
  
     0.756
KRN58512.1
Hypothetical protein.
  
     0.745
KRN59056.1
Hypothetical protein.
  
     0.708
KRN59272.1
Hypothetical protein.
  
     0.702
KRN58436.1
Hypothetical protein.
  
     0.691
KRN58702.1
Tetratricopeptide TPR 2 repeat protein.
  
     0.680
KRN59126.1
Hypothetical protein.
  
     0.670
KRN58523.1
Hypothetical protein.
  
     0.664
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.