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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58812.1ABC superfamily ATP binding cassette transporter substrate binding protein. (280 aa)    
Predicted Functional Partners:
KRN58811.1
ABC transporter permease component.
 
  0.959
KRN58810.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
  0.958
KRN58808.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
  
  0.919
KRN58809.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
  0.878
KRN59308.1
Hypothetical protein.
  
     0.734
KRN59479.1
Hypothetical protein.
  
     0.560
KRN59421.1
Ectoine hydroxyectoine ABC transporter, permease EhuD.
  
  0.557
KRN59295.1
Polar amino acid ABC transporter inner membrane protein.
  
  0.504
KRN58734.1
Ectoine hydroxyectoine ABC transporter, ATP-binding protein.
  
  0.466
KRN59420.1
Glutamine ABC transporter ATP-binding component.
  
  0.466
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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