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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58120.1Peptidase S9 prolyl oligopeptidase. (632 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
  
 
  0.910
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
    
  0.882
KRN58121.1
Amidohydrolase.
 
     0.819
KRN58125.1
Binding-protein-dependent transport systems inner membrane component.
      0.721
KRN58124.1
Binding-protein-dependent transport systems inner membrane component.
       0.717
KRN58123.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
      0.712
KRN58118.1
Peptidase M20.
 
     0.711
KRN58122.1
ABC transporter related; Belongs to the ABC transporter superfamily.
      0.711
KRN58119.1
Amidohydrolase.
 
     0.704
KRN58322.1
PTS system sucrose-specific IIABC component.
    
 
 0.663
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.