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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58125.1Binding-protein-dependent transport systems inner membrane component. (310 aa)    
Predicted Functional Partners:
KRN58122.1
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.999
KRN58123.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
KRN58124.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.999
KRN58126.1
Extracellular solute-binding protein family 5.
 
 0.998
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.727
KRN58121.1
Amidohydrolase.
       0.722
KRN58120.1
Peptidase S9 prolyl oligopeptidase.
      0.721
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
    0.711
KRN58431.1
ABC transporter ATP-binding component.
  
 
 0.669
KRN58119.1
Amidohydrolase.
       0.606
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.