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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58138.1Glycosyltransferase. (297 aa)    
Predicted Functional Partners:
KRN58365.1
Glycosyltransferase.
 
 0.971
KRN58140.1
Glycosyl transferase family 2.
 
 
 0.758
KRN58139.1
Hypothetical protein.
 
     0.711
KRN58144.1
Polysaccharide biosynthesis protein.
 
  
 0.700
KRN58145.1
UDP-galactopyranose mutase.
 
  
 0.682
KRN58153.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.633
KRN58366.1
Sugar transferase.
  
 
 0.566
KRN58148.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.565
KRN58362.1
Glycosyl transferase, group 1 family protein.
  
 0.560
KRN58142.1
Hypothetical protein.
 
     0.554
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.