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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58285.1Hypothetical protein; Belongs to the UPF0237 family. (88 aa)    
Predicted Functional Partners:
KRN58284.1
Glycerol-3-phosphate dehydrogenase.
 
     0.959
KRN58723.1
Competence protein.
     
 0.555
KRN58286.1
Acyl-coa thioesterase.
       0.550
KRN58592.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
  0.434
KRN59415.1
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.430
KRN58171.1
Homoserine dehydrogenase Hdh.
    
  0.420
KRN59500.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
     
 0.409
KRN59501.1
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
     
 0.409
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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