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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58299.1Two component transcriptional regulator. (225 aa)    
Predicted Functional Partners:
KRN58298.1
Integral membrane sensor signal transduction histidine kinase.
 0.993
KRN58296.1
ABC superfamily ATP binding cassette transporter permease and substrate binding protein.
 
    0.898
KRN58297.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
     0.882
KRN59149.1
Phosphate regulon sensor kinase PhoR.
 0.851
KRN58377.1
Two-component system histidine kinase.
 
 0.843
KRN58579.1
Multi-sensor signal transduction histidine kinase.
 0.842
KRN58644.1
Phosphate regulon sensor kinase PhoR.
  0.841
KRN59496.1
Two-component histidine kinase.
  0.749
KRN58394.1
Hypothetical protein.
    
 
 0.560
KRN58300.1
Hypothetical protein.
       0.504
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.