Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN58362.1Glycosyl transferase, group 1 family protein. (373 aa)    
Predicted Functional Partners:
KRN58363.1
Hypothetical protein.
 
 
  0.866
KRN59625.1
Hypothetical protein.
 
 0.735
KRN58365.1
Glycosyltransferase.
 
  
 0.716
KRN58367.1
UDP-glucose 4-epimerase.
 
 
  0.709
KRN58143.1
Hypothetical protein.
      0.698
KRN58364.1
Hypothetical protein.
 
    0.652
KRN58151.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.573
KRN58361.1
Hypothetical protein.
  
    0.570
KRN58359.1
Polysaccharide biosynthesis protein.
  
    0.544
KRN58138.1
Glycosyltransferase.
  
 0.538
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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