STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58475.1PTS system fructose subfamily transporter subunit IIA. (139 aa)    
Predicted Functional Partners:
KRN58477.1
Phosphotransferase system PTS sorbose-specific IIC subunit.
 
 0.998
KRN58476.1
Mannose-specific PTS enzyme IID.
 
 0.996
KRN59339.1
Hypothetical protein.
 
 0.992
KRN59338.1
PTS system transporter.
 
 0.984
KRN58474.1
PTS system protein.
 
 
 0.978
KRN58111.1
Phosphocarrier protein HPr.
  
 0.972
KRN59340.1
Pts system, iib component.
 
 
 0.941
KRN59493.1
Fructokinase.
    
 0.915
KRN58322.1
PTS system sucrose-specific IIABC component.
  
  
 0.730
KRN58634.1
PTS family porter enzyme II.
  
  
 0.730
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.