Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN58493.12-dehydro-3-deoxygluconokinase. (319 aa)    
Predicted Functional Partners:
KRN58482.1
2-dehydro-3-deoxyphosphogluconate aldolase.
 
 
 0.994
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
    
 0.977
KRN58484.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.975
KRN59101.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.934
KRN58492.1
Hypothetical protein.
 
    0.912
KRN58324.1
Sucrose-6-p hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.867
KRN58475.1
PTS system fructose subfamily transporter subunit IIA.
  
 
 0.797
KRN58541.1
L-threonine 3-dehydrogenase.
  
 
 0.796
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.772
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.750
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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