Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KRN58506.1Lipoprotein. (1361 aa)    
Predicted Functional Partners:
KRN58679.1
Cell division protein FtsK SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.646
KRN58117.1
Kxykxgkxw signal domain protein.
 
  
0.580
KRN59585.1
NLP P60 protein.
 
  
0.563
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.548
KRN58270.1
Hypothetical protein.
  
     0.542
KRN58139.1
Hypothetical protein.
  
     0.539
KRN58324.1
Sucrose-6-p hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
    
  0.498
KRN59319.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.480
KRN59249.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 
 0.474
KRN59498.1
Hypothetical protein.
 
  
 0.472
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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