STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58530.1Sucrose phosphorylase. (485 aa)    
Predicted Functional Partners:
KRN58322.1
PTS system sucrose-specific IIABC component.
  
 
 0.990
KRN58634.1
PTS family porter enzyme II.
  
 
 0.990
KRN58324.1
Sucrose-6-p hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.942
KRN59537.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.935
KRN59535.1
Phosphoglucomutase.
    
 0.919
KRN58531.1
Major facilitator superfamily transporter MFS 1.
 
    0.859
KRN58997.1
Amino acid transporter.
   
 0.778
KRN58897.1
Putrescine-ornithine antiporter.
   
 0.778
KRN58224.1
Hypothetical protein.
   
 0.778
KRN58327.1
Amino acid transporter.
   
 0.778
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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