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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58537.1Peptide ABC transporter permease and ATP-binding component. (659 aa)    
Predicted Functional Partners:
KRN58539.1
Peptide ABC transporter permease component.
  
 0.937
KRN58538.1
Lipoprotein releasing system, ATP-binding protein.
 
 
0.918
KRN58297.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
0.788
KRN58555.1
Cell division ATP-binding protein FtsE.
 
 
0.788
KRN58296.1
ABC superfamily ATP binding cassette transporter permease and substrate binding protein.
  
  0.773
KRN58556.1
ABC transporter permease.
  
  0.773
KRN59261.1
Zinc iron ABC transporter permease.
  
 
 0.701
KRN58540.1
Hypothetical protein.
   
 
 0.683
KRN59262.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
0.639
KRN58117.1
Kxykxgkxw signal domain protein.
  
  
 0.638
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.