Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KRN58579.1Multi-sensor signal transduction histidine kinase. (597 aa)    
Predicted Functional Partners:
KRN58578.1
Phosphate regulon transcriptional regulatory protein PhoB.
 0.998
KRN58643.1
Phosphate regulon transcriptional regulatory protein PhoB.
 0.976
KRN59497.1
Phosphate regulon transcriptional regulatory protein PhoB.
 0.950
KRN59150.1
Response regulator.
 0.900
KRN58580.1
Hypothetical protein.
 
  
 0.890
KRN58582.1
Beta-lactamase domain-containing protein.
  
  
 0.876
KRN58581.1
Hypothetical protein.
 
  
 0.871
KRN58299.1
Two component transcriptional regulator.
 
 0.842
KRN58376.1
Two component response regulator.
 0.814
KRN59149.1
Phosphate regulon sensor kinase PhoR.
 
 
0.580
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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