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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN58581.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
KRN58580.1
Hypothetical protein.
 
  
 0.976
KRN58579.1
Multi-sensor signal transduction histidine kinase.
 
  
 0.874
KRN58582.1
Beta-lactamase domain-containing protein.
  
  
 0.849
KRN58578.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
    0.675
KRN59072.1
Hypothetical protein.
  
     0.665
KRN58583.1
Periplasmic serine peptidase DegS.
  
    0.641
KRN59241.1
CBS domain-containing protein.
  
     0.578
KRN59373.1
Adenine-specific methyltransferase.
  
     0.570
KRN58873.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.537
KRN58644.1
Phosphate regulon sensor kinase PhoR.
 
  
 0.453
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.