Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN58593.1Aspartate aminotransferase. (542 aa)    
Predicted Functional Partners:
KRN58597.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
  
  0.919
KRN58170.1
glutamyl-tRNA(Gln) amidotransferase, subunit D.
    
 0.914
KRN58498.1
Asparagine synthase (glutamine-hydrolyzing).
   
 
 0.910
KRN58594.1
YidE YbjL family protein.
 
  
 0.906
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.872
KRN58592.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.804
KRN59576.1
Acetaldehyde dehydrogenase (acetylating); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.669
KRN58796.1
Hypothetical protein.
  
 
 0.602
KRN58513.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.593
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.566
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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