STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metND-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (354 aa)    
Predicted Functional Partners:
KRN58606.1
ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 0.999
KRN58608.1
Binding-protein-dependent transport system inner membrane protein.
 0.999
KRN58124.1
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.913
KRN58188.1
Lipid A export permease ATP-binding protein MsbA.
 
     
0.899
KRN58189.1
Lipid A export permease ATP-binding protein MsbA.
 
     
0.899
KRN59466.1
Lipid A export permease ATP-binding protein MsbA.
 
     
0.879
KRN58609.1
Acetylornithine deacetylase (ArgE).
 
     0.743
KRN59421.1
Ectoine hydroxyectoine ABC transporter, permease EhuD.
 
      0.730
KRN58294.1
Metal-dependent regulator.
   
   0.716
KRN59295.1
Polar amino acid ABC transporter inner membrane protein.
 
      0.590
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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