rny protein (Lactobacillus secaliphilus) - STRING interaction network

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rny

RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. (514 aa)

Predicted Functional Partners:

cinA

0.562

mutL

0.465

mutS

0.465

recA

0.452

ruvA

0.421

KRN59406.1

0.412

Your Current Organism:

Lactobacillus secaliphilus

NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRN59406.1	mutL	IV45_GL001149	IV45_GL001153	Preprotein translocase, yajc subunit.	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	0.632
KRN59406.1	mutS	IV45_GL001149	IV45_GL001154	Preprotein translocase, yajc subunit.	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	0.611
KRN59406.1	rny	IV45_GL001149	IV45_GL001155	Preprotein translocase, yajc subunit.	RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.	0.412
KRN59406.1	ruvA	IV45_GL001149	IV45_GL001152	Preprotein translocase, yajc subunit.	Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.	0.641
cinA	mutL	IV45_GL001157	IV45_GL001153	Competence damage-inducible protein A; Belongs to the CinA family.	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	0.666
cinA	mutS	IV45_GL001157	IV45_GL001154	Competence damage-inducible protein A; Belongs to the CinA family.	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	0.484
cinA	recA	IV45_GL001157	IV45_GL001156	Competence damage-inducible protein A; Belongs to the CinA family.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.921
cinA	rny	IV45_GL001157	IV45_GL001155	Competence damage-inducible protein A; Belongs to the CinA family.	RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.	0.562
cinA	ruvA	IV45_GL001157	IV45_GL001152	Competence damage-inducible protein A; Belongs to the CinA family.	Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.	0.512
mutL	KRN59406.1	IV45_GL001153	IV45_GL001149	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	Preprotein translocase, yajc subunit.	0.632
mutL	cinA	IV45_GL001153	IV45_GL001157	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	Competence damage-inducible protein A; Belongs to the CinA family.	0.666
mutL	mutS	IV45_GL001153	IV45_GL001154	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	0.999
mutL	recA	IV45_GL001153	IV45_GL001156	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.933
mutL	rny	IV45_GL001153	IV45_GL001155	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.	0.465
mutL	ruvA	IV45_GL001153	IV45_GL001152	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.	0.856
mutS	KRN59406.1	IV45_GL001154	IV45_GL001149	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	Preprotein translocase, yajc subunit.	0.611
mutS	cinA	IV45_GL001154	IV45_GL001157	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	Competence damage-inducible protein A; Belongs to the CinA family.	0.484
mutS	mutL	IV45_GL001154	IV45_GL001153	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.	0.999
mutS	recA	IV45_GL001154	IV45_GL001156	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.788
mutS	rny	IV45_GL001154	IV45_GL001155	DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.	RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.	0.465