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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN59496.1Two-component histidine kinase. (483 aa)    
Predicted Functional Partners:
KRN59497.1
Phosphate regulon transcriptional regulatory protein PhoB.
  0.975
KRN58578.1
Phosphate regulon transcriptional regulatory protein PhoB.
  0.972
KRN58643.1
Phosphate regulon transcriptional regulatory protein PhoB.
 0.939
KRN59150.1
Response regulator.
  0.900
KRN58376.1
Two component response regulator.
  0.831
KRN58299.1
Two component transcriptional regulator.
  0.749
KRN59495.1
Sugar transporter.
       0.741
KRN59149.1
Phosphate regulon sensor kinase PhoR.
 
0.542
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.529
KRN59103.1
Serine threonine protein kinase.
   
 0.520
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.