Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN59082.1 | KRN59547.1 | IV45_GL000119 | IV45_GL001295 | Fmu domain-containing protein. | Hypothetical protein. | 0.412 |
KRN59545.1 | KRN59546.1 | IV45_GL001293 | IV45_GL001294 | Competence protein. | Helicase domain-containing protein. | 0.867 |
KRN59545.1 | KRN59547.1 | IV45_GL001293 | IV45_GL001295 | Competence protein. | Hypothetical protein. | 0.545 |
KRN59546.1 | KRN59545.1 | IV45_GL001294 | IV45_GL001293 | Helicase domain-containing protein. | Competence protein. | 0.867 |
KRN59546.1 | KRN59547.1 | IV45_GL001294 | IV45_GL001295 | Helicase domain-containing protein. | Hypothetical protein. | 0.689 |
KRN59547.1 | KRN59082.1 | IV45_GL001295 | IV45_GL000119 | Hypothetical protein. | Fmu domain-containing protein. | 0.412 |
KRN59547.1 | KRN59545.1 | IV45_GL001295 | IV45_GL001293 | Hypothetical protein. | Competence protein. | 0.545 |
KRN59547.1 | KRN59546.1 | IV45_GL001295 | IV45_GL001294 | Hypothetical protein. | Helicase domain-containing protein. | 0.689 |
KRN59547.1 | recA | IV45_GL001295 | IV45_GL001156 | Hypothetical protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.490 |
recA | KRN59547.1 | IV45_GL001156 | IV45_GL001295 | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.490 |