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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN59573.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
KRN59574.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.995
KRN58461.1
NrdI family protein; Belongs to the NrdI family.
 
  
 0.816
KRN59575.1
Ribonucleoside-diphosphate reductase, beta subunit.
  
  
 0.756
KRN58312.1
Hypothetical protein.
  
     0.733
KRN59536.1
Thioredoxin-disulfide reductase.
   
 0.604
KRN59216.1
Anaerobic ribonucleoside-triphosphate reductase.
 
  
 0.590
KRN58428.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.563
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
  0.558
KRN58773.1
Dihydrolipoyl dehydrogenase.
  
 0.547
KRN58348.1
Glutathione-disulfide reductase.
  
 0.547
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.