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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN59331.1RND superfamily resistance-nodulation-cell division proton (H+) antiporter. (769 aa)    
Predicted Functional Partners:
KRN59330.1
Hypothetical protein; Belongs to the UPF0255 family.
 
     0.909
KRN59332.1
TetR protein.
 
    0.839
KRN59103.1
Serine threonine protein kinase.
   
 
 0.831
KRN59329.1
Hypothetical protein.
 
     0.803
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.645
KRN58317.1
Hypothetical protein.
 
      0.625
KRN58198.1
Transcriptional regulator, TetR family.
 
    0.618
KRN58684.1
Stage V sporulation protein D.
   
 
 0.614
KRN59220.1
Abi family protein.
  
     0.504
KRN59328.1
Heavy metal translocating P-type ATPase.
       0.408
Your Current Organism:
Lactobacillus secaliphilus
NCBI taxonomy Id: 396268
Other names: CCUG 53218, DSM 17896, JCM 15613, L. secaliphilus, Lactobacillus secaliphilus Ehrmann et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.