STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV40481.1Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
KJV40480.1
Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
KJV40432.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
 
     0.496
Your Current Organism:
Acinetobacter brisouii
NCBI taxonomy Id: 396323
Other names: A. brisouii, Acinetobacter brisoui Anandham et al. 2011, CIP 110357, DSM 18516, KACC 11602, strain 5YN5-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.