STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_0423Hypothetical protein. (54 aa)    
Predicted Functional Partners:
Tgr7_0424
Hypothetical protein.
       0.773
Tgr7_0425
PFAM: protein of unknown function DUF1018; KEGG: eca:ECA3696 putative phage regluatory protein.
       0.773
Tgr7_0426
KEGG: bpt:Bpet4398 hypothetical protein.
       0.773
Tgr7_0419
Hypothetical protein.
       0.561
Tgr7_0420
Hypothetical protein.
       0.561
Tgr7_0421
Hypothetical protein.
       0.561
Tgr7_0422
Hypothetical protein.
       0.561
Tgr7_0427
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mfa:Mfla_2707 N-acetylmuramoyl-L-alanine amidase.
       0.561
Tgr7_0428
Hypothetical protein.
       0.561
Tgr7_0429
Hypothetical protein.
       0.561
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.