STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_0445KEGG: tcx:Tcr_1999 methyl-accepting chemotaxis sensory transducer. (395 aa)    
Predicted Functional Partners:
Tgr7_1216
PFAM: MCP methyltransferase CheR-type; KEGG: psp:PSPPH_3412 chemotaxis protein methyltransferase CheR.
 
 0.985
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.984
Tgr7_1341
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: pmy:Pmen_2802 CheA signal transduction histidine kinase.
 
 0.979
Tgr7_1347
PFAM: CheW domain protein; KEGG: saz:Sama_2272 purine-binding chemotaxis protein CheW.
 
 0.977
Tgr7_1063
KEGG: pmy:Pmen_2852 putative CheW protein.
 
 0.975
Tgr7_2900
KEGG: pfl:PFL_5823 sensor histidine kinase/response regulator ChpA, putative.
 
 
 0.972
Tgr7_1339
PFAM: response regulator receiver; KEGG: pap:PSPA7_3871 two-component response regulator CheY.
  
  0.940
Tgr7_1215
PFAM: response regulator receiver; CheW domain protein; KEGG: ppr:PBPRA0899 putative chemotaxis CheV.
 
 0.916
Tgr7_1346
PFAM: CheW domain protein; KEGG: maq:Maqu_1967 CheW domain-containing protein.
  
 0.890
Tgr7_0506
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: ter:Tery_3412 adenylate/guanylate cyclase.
  
 
 0.670
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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