STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_0777KEGG: hha:Hhal_2028 hypothetical protein. (146 aa)    
Predicted Functional Partners:
Tgr7_1974
KEGG: smt:Smal_1889 hypothetical protein.
  
     0.596
Tgr7_0778
PFAM: Peptidase M23; KEGG: hch:HCH_05874 membrane protein related to metalloendopeptidase.
       0.571
Tgr7_2448
KEGG: noc:Noc_2348 hypothetical protein.
  
     0.556
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
       0.478
Tgr7_0181
PFAM: isochorismatase hydrolase; KEGG: noc:Noc_0780 isochorismatase hydrolase.
  
     0.475
Tgr7_0781
TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: csa:Csal_2179 hypothetical protein.
 
     0.465
Tgr7_1513
Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.446
Tgr7_3127
PFAM: porin Gram-negative type; KEGG: abo:ABO_2163 hypothetical protein.
  
     0.430
Tgr7_2767
KEGG: noc:Noc_2577 hypothetical protein.
  
     0.419
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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