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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_1925Putative transcriptional regulator, ArsR family; KEGG: ppu:PP_1930 arsenic resistance transcriptional regulator. (117 aa)    
Predicted Functional Partners:
Tgr7_2828
KEGG: bpt:Bpet4552 hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.740
Tgr7_2520
Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
  
 0.618
Tgr7_1924
KEGG: rca:Rcas_2314 glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.548
Tgr7_1926
Thioredoxin; KEGG: neu:NE0084 thioredoxin.
       0.544
Tgr7_2949
PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: bha:BH2998 arsenate reductase.
 
  
 0.510
Tgr7_1923
KEGG: mgm:Mmc1_2971 major facilitator superfamily MFS_1.
 
   
 0.492
Tgr7_2514
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aeh:Mlg_1383 heavy metal translocating P-type ATPase.
  
  
 0.439
Tgr7_1927
PFAM: regulatory protein MarR; KEGG: mca:MCA2045 MarR family transcriptional regulator.
     
 0.414
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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