STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_2357Glycosyltransferase-like protein; KEGG: tye:THEYE_A0429 glycosyl transferase, group 1. (408 aa)    
Predicted Functional Partners:
Tgr7_2400
KEGG: noc:Noc_1999 undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.580
Tgr7_2359
Dehydrogenase and related protein-like protein; KEGG: sil:SPO0852 Gfo/Idh/MocA family oxidoreductase.
  
  
 0.537
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.534
Tgr7_2083
KEGG: mmw:Mmwyl1_0842 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.503
Tgr7_2358
Glycosyltransferase-like protein; KEGG: swi:Swit_2376 glycosyl transferase, group 1.
       0.497
Tgr7_2356
KEGG: hha:Hhal_0759 ABC transporter related.
  
    0.473
Tgr7_2339
Nucleotide sugar dehydrogenase; KEGG: mca:MCA2487 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.440
Tgr7_2106
KEGG: pfo:Pfl01_4058 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.400
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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