STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_2665KEGG: sfr:Sfri_2739 hypothetical protein. (217 aa)    
Predicted Functional Partners:
Tgr7_2669
KEGG: noc:Noc_1287 cation antiporter.
 
 
 0.990
Tgr7_2667
KEGG: sfr:Sfri_2737 putative monovalent cation/H+ antiporter subunit G.
 
 
 0.988
Tgr7_2666
KEGG: sfr:Sfri_2738 hypothetical protein.
 
 
 0.987
Tgr7_2668
KEGG: noc:Noc_1286 multiple resistance and pH regulation protein F.
 
 
 0.986
Tgr7_2664
KEGG: aeh:Mlg_0742 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.982
Tgr7_2661
KEGG: noc:Noc_1279 NADH/ubiquinone/plastoquinone (complex I).
 
 
 0.978
Tgr7_2663
KEGG: noc:Noc_1281 NADH dehydrogenase (quinone).
 
 
 0.978
Tgr7_2662
KEGG: noc:Noc_1280 NADH dehydrogenase (quinone).
 
 
 0.965
Tgr7_2526
KEGG: aeh:Mlg_2092 putative monovalent cation/H+ antiporter subunit C.
  
 
 0.826
Tgr7_2525
KEGG: aeh:Mlg_2093 NADH dehydrogenase (quinone).
  
 
 0.796
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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