Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tgr7_3119 | Tgr7_3120 | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | 0.997 |
Tgr7_3119 | Tgr7_3121 | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | 0.433 |
Tgr7_3119 | Tgr7_3122 | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | 0.433 |
Tgr7_3120 | Tgr7_3119 | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.997 |
Tgr7_3120 | Tgr7_3121 | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | 0.497 |
Tgr7_3120 | Tgr7_3122 | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | 0.497 |
Tgr7_3121 | Tgr7_3119 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.433 |
Tgr7_3121 | Tgr7_3120 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | 0.497 |
Tgr7_3121 | Tgr7_3122 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | 0.973 |
Tgr7_3122 | Tgr7_3119 | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | PFAM: nitrogen regulatory protein P-II; KEGG: csa:Csal_3163 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.433 |
Tgr7_3122 | Tgr7_3120 | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter. | 0.497 |
Tgr7_3122 | Tgr7_3121 | PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_0076 hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1316 putative ATP binding protein. | 0.973 |