STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK90_0111Hypothetical protein; KEGG: kpn:KPN_01957 major facilitator family transporter. (204 aa)    
Predicted Functional Partners:
TK90_0112
KEGG: reh:H16_B2314 hypothetical protein.
       0.773
TK90_0113
KEGG: hau:Haur_0164 hypothetical protein.
       0.773
TK90_0114
KEGG: pai:PAE0435 hypothetical protein.
       0.651
TK90_0109
KEGG: rlg:Rleg_2058 hypothetical protein.
       0.528
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.